watershed2

This is a basic watershed algorithm that can be used as a faster alternative
to <code>EBImage::watershed()</code>. I strongly suggest using this only with round
objects, since it doesn't consider both 'extension' and 'tolerance' arguments
of <code>EBImage::watershed()</code>.

Tools for single or batch image manipulation and analysis as
described by Olivoto (2022) <doi:10.1111/2041-210X.13803> that can be
used to quantify plant leaf area, assess disease severity, count
objects, obtain shape measures, object landmarks, and compute
Elliptical Fourier Analysis of the object outline, as described by
Claude (2008) <doi:10.1007/978-0-387-77789-4>. Additionally, the
package includes tools for analyzing grids, which enables high
throughput field phenotyping using RGB imagery captured by unmanned
aerial vehicles.

Tiago Olivoto

pliman

Tools for Plant Image Analysis

watershed2 function

<dl><dt>binary</dt>
<dd>A binary image</dd>
<dt>dist_thresh</dt>
<dd>The distance threshold to create the</dd>
<dt>plot</dt>
<dd>If <code>TRUE</code> (default) plots the labeled objects</dd></dl>

Arguments

Alternative watershed algorithm — watershed2

<dl>

<dt>binary</dt>
<dd>A binary image</dd>


<dt>dist_thresh</dt>
<dd>The distance threshold to create the</dd>


<dt>plot</dt>
<dd>If <code>TRUE</code> (default) plots the labeled objects</dd>

</dl>

watershed2: Alternative watershed algorithm

Description

Usage

Value

Arguments

Examples