pmartR (version 2.4.6)

summary.customFilt: Custom Filter Summary

Description

Provide summary of a customFilt S3 object

Usage

# S3 method for customFilt
summary(object, ...)

Value

a summary of the items in e_data, f_data, and e_meta that will be removed as a result of applying the custom filter.

Arguments

object

S3 object of class 'customFilt' created by custom_filter.

...

further arguments passed to or from other methods

Author

Lisa Bramer

See Also

custom_filter

Examples

if (FALSE) { # requireNamespace("pmartRdata", quietly = TRUE)
library(pmartRdata)
to_filter <- custom_filter(omicsData = metab_object, e_data_remove = "fumaric acid",
                           f_data_remove = "Sample_1_Phenotype2_B")
summary(to_filter)

to_filter2 <- custom_filter(omicsData = metab_object, 
                            f_data_keep = metab_object$f_data$SampleID[1:10])
summary(to_filter2)
}