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pmparser (version 1.0.24)

Create and Maintain a Relational Database of Data from PubMed/MEDLINE

Description

Provides a simple interface for extracting various elements from the publicly available PubMed XML files, incorporating PubMed's regular updates, and combining the data with the NIH Open Citation Collection. See Schoenbachler and Hughey (2021) .

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Install

install.packages('pmparser')

Monthly Downloads

318

Version

1.0.24

License

GPL-2

Issues

1

Pull Requests

0

Stars

19

Forks

2

Maintainer

Jake Hughey

Last Published

February 5th, 2026

Functions in pmparser (1.0.24)

modifyPubmedDb

Create or update a PubMed database
getCitation

Get public-domain citation data
parseElement

Parse elements from a PubMed XML file
getPgParams

Get Postgres connection parameters