accept_progress_bar

The progress bar displays several elements, the progress visually as a bar
being filled and the percentage complete as per the standard
utils::txtProgressBar and additionally the average across subjects of the
rate of accepting newly generated particles.

internal

Provides an R implementation of the Particle Metropolis within
Gibbs sampler for model parameter, covariance matrix and random effect
estimation. A more general implementation of the sampler based on the paper
by Gunawan, D., Hawkins, G. E., Tran, M. N., Kohn, R., & Brown, S. D.
(2020) <doi:10.1016/j.jmp.2020.102368>. An HTML tutorial document describing
the package is available at
<https://university-of-newcastle-research.github.io/samplerDoc/> and
includes several detailed examples, some background and troubleshooting
steps.

Gavin Cooper

pmwg

Particle Metropolis Within Gibbs

Reilly Innes

Caroline Kuhne

Jon-Paul Cavallaro

David Gunawan

Guy Hawkins

Scott Brown

Niek Stevenson

accept_progress_bar function

<dl><dt>min</dt>
<dd>The minimum of the value being updated for the progress bar</dd>
<dt>max</dt>
<dd>The maximum of the value being updated for the progress bar</dd></dl>

Arguments

An altered version of the utils:txtProgressBar that shows acceptance rate — accept_progress_bar

<dl>

<dt>min</dt>
<dd>The minimum of the value being updated for the progress bar</dd>


<dt>max</dt>
<dd>The maximum of the value being updated for the progress bar</dd>

</dl>

An altered version of the utils:txtProgressBar that shows acceptance rate

accept_progress_bar: An altered version of the utils:txtProgressBar that shows acceptance rate

Description

Usage

Value

Arguments