augment_sampler_epsilon

Older sampler object will be missing subject specific scaling parameter
(epsilon) storage, and running a stage with an updated pmwg will fail. To
fix this you can run the augment_sampler_epsilon function to fill the
appropriate array internals with NA values

Provides an R implementation of the Particle Metropolis within
Gibbs sampler for model parameter, covariance matrix and random effect
estimation. A more general implementation of the sampler based on the paper
by Gunawan, D., Hawkins, G. E., Tran, M. N., Kohn, R., & Brown, S. D.
(2020) <doi:10.1016/j.jmp.2020.102368>. An HTML tutorial document describing
the package is available at
<https://university-of-newcastle-research.github.io/samplerDoc/> and
includes several detailed examples, some background and troubleshooting
steps.

Gavin Cooper

pmwg

Particle Metropolis Within Gibbs

Reilly Innes

Caroline Kuhne

Jon-Paul Cavallaro

David Gunawan

Guy Hawkins

Scott Brown

Niek Stevenson

augment_sampler_epsilon function

<dl><dt>sampler</dt>
<dd>The sampler object to augment</dd></dl>

Arguments

Augment existing sampler object to have subject specific epsilon storage — augment_sampler_epsilon

<dl>

<dt>sampler</dt>
<dd>The sampler object to augment</dd>

</dl>

augment_sampler_epsilon: Augment existing sampler object to have subject specific epsilon storage

Description

Usage

Value

Arguments