Initializes a .mlxtran file based on a converted model file, data, and initial values
mlx_model_initializer(
model_name,
model_file,
data_file,
header_types,
parm_names,
parm_inis,
theta_names,
theta_inis,
pop = FALSE,
omega_inis = NULL,
pre_fixef = NULL,
obs_types = NULL,
mapping = NULL
)No return value, saving a Monolix .mlxtran file.
(string) (Path/)Name of generated .mlxtran file
(string) (Path/)Name of converted structural model
(string) (Path/)Name of data file to be fitted
(vector) Vector of strings describing column types of data
(list) List of names of non-NN parameters in the model
(list) List of initial values of non-NN parameters
(list) List of names of NN parameters in the model, i.e., weights and biases
(list) List of initial values of NN parameters
(boolean) If only population fit without inter-individual variability (TRUE) or individual fits with inter-individual variability (FALSE) should be used
(numeric) Initial standard deviation of random effects on NN parameters; standard 0.1 from nn_converter_mlx
(named vector) Named vector of all initial values to be used for NN and non-NN parameters
(list) List of types of observations, e.g., “continuous”; only required if non-continuous observations
(list) List of mapping between model outputs and observation IDs
Dominic Bräm
If no specific file name was given to nn_converter_mlx through the mlx_name argumen, the file is standardized to name of model file_mlx_file_pop/ind where pop if pop=TRUE or ind if pop=FALSE in nn_converter_mlx.