nn_extractor

Extract the entire NN functions from a model file

internal

An easy-to-use tool for implementing Neural Ordinary Differential Equations (NODEs) in pharmacometric software such as 'Monolix', 'NONMEM', and 'nlmixr2', see Bräm et al. (2024) <doi:10.1007/s10928-023-09886-4> and Bräm et al. (2025) <doi:10.1002/psp4.13265>. The main functionality is to automatically generate structural model code describing computations within a neural network. Additionally, parameters and software settings can be initialized automatically. For using these additional functionalities with 'Monolix', 'pmxNODE' interfaces with 'MonolixSuite' via the 'lixoftConnectors' package. The 'lixoftConnectors' package is distributed with 'MonolixSuite' (<https://monolixsuite.slp-software.com/r-functions/2024R1/package-lixoftconnectors>) and is not available from public repositories.

Dominic Bräm

pmxNODE

Application of NODEs in 'Monolix', 'NONMEM', and 'nlmixr2'

Bernhard Steiert

Gilbert Koch

Matthew Fidler

nn_extractor function

<dl><dt>text</dt>
<dd>(string) Line of model code as string</dd></dl>

Arguments

Author

Internal: Extract NN function from model — nn_extractor

<dl>

<dt>text</dt>
<dd>(string) Line of model code as string</dd>

</dl>

nn_extractor: Internal: Extract NN function from model

Description

Usage

Value

Arguments

Author