calc_binning_thresholds

<p>An integer matrix with markers in rows and individuals in columns.</p>

dosage_matrix

<p>Calculate LOD and recombination frequency thresholds for marker binning</p>

Creation of linkage maps in polyploid species from marker dosage
scores of an F1 cross from two heterozygous parents. Currently works for autotriploid, autotetraploid and autohexaploid species,
as well as segmental allotetraploids. Methods are described in a manuscript of Bourke et al. (2018) <doi:10.1093/bioinformatics/bty371>.

Peter Bourke

calc_binning_thresholds: calc_binning_thresholds

Description

Usage

Arguments