all_linkages_list_P1

all_linkages_list_P1_split

all_linkages_list_P1_subset

A (nested) list of linkage data frames classified per linkage group and homologue

datasets

Creation of linkage maps in polyploid species from marker dosage
scores of an F1 cross from two heterozygous parents. Currently works for outcrossing diploid, autotriploid, autotetraploid and autohexaploid species,
as well as segmental allotetraploids. Methods are described in a manuscript of Bourke et al. (2018) <doi:10.1093/bioinformatics/bty371>. Since version 1.1.0,
both discrete and probabilistic genotypes are acceptable input; for more details on the latter see Liao et al. (2021) <doi:10.1007/s00122-021-03834-x>.

Peter Bourke

polymapR

Linkage Analysis in Outcrossing Polyploids

Geert van Geest

Roeland Voorrips

Yanlin Liao

all_linkages_list_P1 function

An object of class <code>list</code> of length 5.
An object of class <code>list</code> of length 5.
An object of class <code>list</code> of length 5.

Format

A (nested) list of linkage data frames classified per linkage group and homologue — all_linkages_list_P1

A (nested) list of linkage data frames classified per linkage group and homologue

all_linkages_list_P1: A (nested) list of linkage data frames classified per linkage group and homologue

Description

Usage

Arguments

Format