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pomp (version 0.28-2)

Statistical inference for partially observed Markov processes

Description

Inference methods for partially-observed Markov processes

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Version

Install

install.packages('pomp')

Monthly Downloads

1,238

Version

0.28-2

License

GPL (>= 2)

Maintainer

Aaron King

Last Published

March 23rd, 2010

Functions in pomp (0.28-2)

LondonYorke

Reported cases of chickenpox, measles, and mumps from Baltimore and New York, 1928--1972
B-splines

B-spline bases
dprocess-pomp

Evaluate the probability density of state transitions in a Markov process
euler

Plug-ins for dynamical models based on stochastic Euler algorithms
dmeasure-pomp

Evaluate the probability density of observations given underlying states in a partially-observed Markov process
init.state-pomp

Return a matrix of initial conditions given a vector of parameters and an initial time.
mif-class

The "mif" class
euler.sir

Seasonal SIR model implemented as an Euler-multinomial model
mif-methods

Methods of the "mif" class
Euler-multinomial models

Euler-multinomial models
mif

The MIF algorithm
nlf

Fit Model to Data Using Nonlinear Forecasting (NLF)
ou2

Two-dimensional Ornstein-Uhlenbeck process
pfilter

Particle filter
particles-mif

Generate particles from the user-specified distribution.
pomp-class

Partially-observed Markov process
pomp-package

Partially-observed Markov processes
pomp-methods

Methods of the "pomp" class
rw2

Two-dimensional random-walk process
rprocess-pomp

Simulate the process model of a partially-observed Markov process
pomp

Partially-observed Markov process object.
rmeasure-pomp

Simulate the measurement model of a partially-observed Markov process
skeleton-pomp

Evaluate the deterministic skeleton at the given points in state space.
simulate-pomp

Running simulations of a partially-observed Markov process
slice.design

Design matrices for likelihood slices and profiles
verhulst

Simple Verhulst-Pearl (logistic) model.
trajectory-pomp

Compute trajectories of the determinstic skeleton.
traj.match

Trajectory matching
sobol

Sobol' low-discrepancy sequence