D.stat

Computes the value of the D-statistic given the values of the two particular
allelic patterns.

internal

Provides functions to simulate Pool-seq data under models of
demographic formation and to import Pool-seq data from real populations.
Implements two ABC algorithms for performing parameter estimation and
model selection using Pool-seq data. Cross-validation can also be
performed to assess the accuracy of ABC estimates and model choice.
Carvalho et al., (2022) <doi:10.1111/1755-0998.13834>.

João Carvalho

poolABC

Approximate Bayesian Computation with Pooled Sequencing Data

Vítor Sousa

D.stat function

<dl><dt>ABBA</dt>
<dd>is a numeric vector with the values for the ‘ABBA’ allelic
pattern.</dd>
<dt>BABA</dt>
<dd>is a numeric vector with the values for the ‘BABA’ allelic
pattern.</dd></dl>

Arguments

calculate D-statistic — D.stat

<dl>

<dt>ABBA</dt>
<dd>is a numeric vector with the values for the ‘ABBA’ allelic
pattern.</dd>


<dt>BABA</dt>
<dd>is a numeric vector with the values for the ‘BABA’ allelic
pattern.</dd>

</dl>

D.stat: calculate D-statistic

Description

Usage

Value

Arguments