removeVar

Removes summary statistics with zero variance.

internal

Provides functions to simulate Pool-seq data under models of
demographic formation and to import Pool-seq data from real populations.
Implements two ABC algorithms for performing parameter estimation and
model selection using Pool-seq data. Cross-validation can also be
performed to assess the accuracy of ABC estimates and model choice.
Carvalho et al., (2022) <doi:10.1111/1755-0998.13834>.

João Carvalho

poolABC

Approximate Bayesian Computation with Pooled Sequencing Data

Vítor Sousa

removeVar function

<dl><dt>observed</dt>
<dd>is a matrix of observed summary statistics. Each column
should be a different summary statistic.</dd>
<dt>sumstats</dt>
<dd>is a matrix of simulated summary statistics. Each column
should be a different summary statistic and each row a different
simulation.</dd></dl>

Arguments

Remove columns with zero variance — removeVar

<dl>

<dt>observed</dt>
<dd>is a matrix of observed summary statistics. Each column
should be a different summary statistic.</dd>


<dt>sumstats</dt>
<dd>is a matrix of simulated summary statistics. Each column
should be a different summary statistic and each row a different
simulation.</dd>

</dl>

removeVar: Remove columns with zero variance

Description

Usage

Value

Arguments

Details