hap2geno

This function converts haplotypes simulated with <code>scrm::scrm()</code> into
genotypes by adding the entries on one row with the entries of the subsequent
row.

internal

Simulates pooled sequencing data under a variety of conditions.
Also allows for the evaluation of the average absolute difference between allele frequencies
computed from genotypes and those computed from pooled data.
Carvalho et al., (2022) <doi:10.1101/2023.01.20.524733>.

João Carvalho

poolHelper

Simulates Pooled Sequencing Genetic Data

Vítor Sousa

hap2geno function

<dl><dt>haplo</dt>
<dd>a matrix of haplotypes obtained from the simulations done with
<code>scrm::scrm()</code>. Each column of the matrix is a different site and each row
is a different haplotype.</dd></dl>

Arguments

Convert haplotypes to genotypes — hap2geno

<dl>

<dt>haplo</dt>
<dd>a matrix of haplotypes obtained from the simulations done with
<code>scrm::scrm()</code>. Each column of the matrix is a different site and each row
is a different haplotype.</dd>

</dl>

hap2geno: Convert haplotypes to genotypes

Description

Usage

Value

Arguments