plot_filter_stats: Plot the results of filter_stats
Description
Plot the results of filter_statsUsage
plot_filter_stats(x, fstats, distmat, cols = NULL, nclone = NULL,
breaks = NULL)
Arguments
x
a genlight of genind object
cols
colors to use for each algorithm (defaults to RColorBrewer
set 1) Value
- a plot depicting how many MLLs are collapsed as the genetic distance
increases for each algorithm.
References
ZN Kamvar, JC Brooks, and NJ Grünwald. 2015. Supplementary
Material for Frontiers Plant Genetics and Genomics 'Novel R tools for
analysis of genome-wide population genetic data with emphasis on clonality'.
DOI: http://dx.doi.org/10.5281/zenodo.17424{10.5281/zenodo.17424}Kamvar ZN, Brooks JC and Grünwald NJ (2015) Novel R tools for analysis of
genome-wide population genetic data with emphasis on clonality. Front. Genet.
6:208. doi:
http://dx.doi.org/10.3389/fgene.2015.00208{10.3389/fgene.2015.00208}