⚠️There's a newer version (1.9) of this package. Take me there.

ppiPre (version 1.8)

Predict Protein-Protein Interactions Based on Functional and Topological Similarities

Description

Computing similarities between proteins based on their GO annotation, KEGG annotation and PPI network topology. It integrates seven features (TCSS, IntelliGO, Wang, KEGG, Jaccard, RA and AA) to predict PPIs using an SVM classifier. Some internal functions are derived from R package GOSemSim authored by Guangchuang Yu.

Copy Link

Version

Down Chevron

Install

install.packages('ppiPre')

Monthly Downloads

40

Version

1.8

License

GPL-2

Maintainer

Last Published

July 1st, 2015

Functions in ppiPre (1.8)