Jaccard distance matrix
Diploid loci matrix initialization
Distance ratio test statistics for distance based clustering
Mean distance to kth nearest neighbor
Format conversion for codominant marker data
Generate spatial weights from prabclus neighborhood list
Test of neighborhood list
Missing values statistics for matrix
Internal: compares two pairs of alleles
Converts alleleobject into binary matrix
Shared allele distance for diploid loci
geco distance matrix
Largest connectivity component
Parametric bootstrap test for clustering in abundance matrices
Piecewise linear transformation for distance matrices
Internal: create allele list out of character matrix
Internal: generates neighborhood list for diploid loci
Clustering for biotic elements or for species delimitation
(mixture method)
Dice distance matrix
Convert abundance matrix into presence/absence matrix
Nestedness matrix
Parametric bootstrap test for clustering in presence-absence matrices
Overwater distances between islands in the Aegean sea
Estimates SAR model from log-abundance matrix of prab-object.
Simulation of abundance matrices (non-clustered)
p-value simulation for presence-absence matrices clustering test
Microsatellite genetic data of Tetragonula bees
Presence-absence/abundance matrix initialization
Herbs of the Siskiyou Mountains
Kulczynski distance matrix
Spatial autocorrelation parameter estimation
Compare species clustering and species groups
Connected regions per species
Internal: create character matrix out of allele list
Neighborhood list for Aegean islands
Region-wise cluster membership
Quantitative Kulczynski distance matrix
Neighborhood list from geographical distance
Stress values for different dimensions of Kruskal's MDS
Average within-group distances for given groups
Genetic AFLP data of Veronica plants
Classical distance-based test for homogeneity against clustering
Clustering of species ranges from presence-absence matrices
(hierarchical methods)
Simulation of presence-absence matrices (non-clustered)
Nearest neighbor based clutter/noise detection
Visualises clusters of markers vs. species
Simulation of presence-absence matrices (clustered)
Connectivity components of an undirected graph
prabclus package overview
Snail presence-absence data from Aegean sea
Geographical coordinates to distances