preseqR (version 4.0.0)

SRR1301329_base: Coverage histogram of a WES data

Description

The coverage histogram is based on a whole-exome sequencing (WES) data from Simons Foundation Autism Research Initiative with the accession number SRR1301329. Only forward reads are used to generate the coverage histogram.

Details

A two-column matrix. The first column is the frequency \(j = 1,2,\dots\); and the second column is \(N_j\), the number of nucleotides in the genome covered exactly \(j\) times.

References

Simons Foundation Autism Research Initiative (https://www.sfari.org/).

Examples

# NOT RUN {
##load library
library(preseqR)

##load data
data(SRR1301329_base)
# }