prevR v3.3
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Estimating Regional Trends of a Prevalence from a DHS
Spatial estimation of a prevalence surface
or a relative risks surface, using data from a Demographic and Health
Survey (DHS) or an analog survey.
Functions in prevR
| Name | Description | |
| Noptim | Suggested optimal value for N | |
| fdhs | Fictitious data generated by a DHS simulation. | |
| print,prevR-method | Summary of a prevR object. | |
| TMWorldBorders | Dataset "TM World Borders Dataset 0.3". | |
| rings,prevR-method | Calculation of rings of equal number of observation and/or equal radius. | |
| as.prevR | Create an object of class prevR. | |
| changeproj,prevR-method | Convert map projection of a object of class prevR. | |
| krige,ANY,prevR-method | Spatial interpolation (kriging and inverse distance weighting) for objects of class prevR. | |
| as.data.frame.prevR | Convert an object of class prevR into a data.frame. | |
| kde,prevR-method | Kernel density estimation for prevR object. | |
| as.SpatialGrid,prevR-method | Create a spatial grid from an object of class prevR. | |
| NA.outside.SpatialPolygons | Affect NA value to points located outside a polygon. | |
| prevR-package | Estimating regional trends of a prevalence from a DHS. | |
| prevR-class | Objects of class prevR. | |
| theme_prevR | prevR themes for ggplot2 | |
| import.dhs | Import DHS data. | |
| create.boundary | Provide national boundaries of a country. | |
| quick.prevR | Quick prevR analysis and plot | |
| point.in.SpatialPolygons | Test if a point falls within a given polygon. | |
| prevR.colors | Continuous color palettes. | |
| show,prevR-method | Summary of a prevR object. | |
| export,prevR-method | Export an object of class prevR. | |
| plot,prevR,missing-method | Plot object of class prevR. | |
| xyz2dataframe | Convert a surface in xyz to a data frame. | |
| is.prevR | Test if an object is of class prevR. This function test if the class of an object is prevR. It could be used to test the slot rings or the slot boundary. | |
| summary,prevR-method | Detailed summary of the variables of a prevR object | |
| direct.label_prevR | Direct label on a ggplot object | |
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Details
| Type | Package |
| Date | 2016-02-23 |
| Acknowledgements | funding from ANRS and IRD, and technical support from LYSIS (info@lysis-consultants.fr) |
| License | CeCILL |
| URL | http://www.ceped.org/prevR, http://joseph.larmarange.net/prevR |
| LazyLoad | yes |
| LazyData | yes |
| Encoding | UTF-8 |
| Collate | 'prevR-package.r' 'setClass.prevR.r' 'is.prevR.r' 'as.prevR.r' 'onAttach.r' 'isInputOk.prevR.r' 'changeproj.prevR.r' 'colors.prevR.r' 'as.data.frame.prevR.r' 'plot.prevR.r' 'show.prevR.r' 'print.prevR.r' 'summary.prevR.r' 'rings.prevR.r' 'as.SpatialGrid.prevR.r' 'create.boundary.prevR.r' 'export.prevR.r' 'import.dhs.prevR.r' 'point.in.SpatialPolygons.prevR.r' 'NA.outside.SpatialPolygons.prevR.r' 'xyz2dataframe.prevR.r' 'init.exp.model.variogram.r' 'eyefit.prevR.r' 'krige.prevR.r' 'kde.prevR.r' 'Noptim.r' 'theme_prevR.r' 'direct.label_prevR.r' 'quick.prevR.r' |
| RoxygenNote | 5.0.1 |
| NeedsCompilation | no |
| Packaged | 2016-02-23 18:10:11 UTC; LARMARANGE Joseph |
| Repository | CRAN |
| Date/Publication | 2016-02-23 23:05:51 |
| depends | base (>= 2.10) , directlabels , ggplot2 , R (>= 2.10) , rgdal (>= 0.7-4) , sp |
| imports | fields , foreign , GenKern , gstat , maptools , methods |
| suggests | geoR , tcltk |
| Contributors | Joseph Larmarange |
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