.name_deprecation

Provides lifecycle management consistently across several functions.
Currently uses <code><a href="https://lifecycle.r-lib.org/reference/deprecate_soft.html">lifecycle::deprecate_soft()</a></code> - i.e. warns only when used
directly. In future versions, this will switch to warning unconditionally
with <code><a href="https://lifecycle.r-lib.org/reference/deprecate_soft.html">lifecycle::deprecate_warn()</a></code>, then throwing via
<code><a href="https://lifecycle.r-lib.org/reference/deprecate_soft.html">lifecycle::deprecate_warn()</a></code>, and finally be deleted along with the subject
arguments.

internal

Provides functions for working with primary
event censored distributions and 'Stan' implementations for use in Bayesian
modeling. Primary event censored distributions are useful for modeling
delayed reporting scenarios in epidemiology and other fields (Charniga et
al. (2024) <doi:10.48550/arXiv.2405.08841>). It also provides support for
arbitrary delay distributions, a range of common primary distributions, and
allows for truncation and secondary event censoring to be accounted for
(Park et al. (2024) <doi:10.1101/2024.01.12.24301247>). A subset of
common distributions also have analytical solutions implemented, allowing
for faster computation. In addition, it provides multiple methods for
fitting primary event censored distributions to data via optional
dependencies.

Sam Abbott 

primarycensored

Primary Event Censored Distributions

Sam Abbott

Sam Brand

Adam Howes

James Mba Azam

Carl Pearson

Sebastian Funk

Kelly Charniga

.name_deprecation function

<dl><dt>pdist_name</dt>
<dd>the deprecated variable to check</dd>
<dt>dprimary_name</dt>
<dd>the deprecated variable to check</dd>
<dt>env, user_env</dt>
<dd>Pair of environments that define where <code>deprecate_*()</code>
was called (used to determine the package name) and where the function
called the deprecating function was called (used to determine if
<code>deprecate_soft()</code> should message).
These are only needed if you're calling <code>deprecate_*()</code> from an internal
helper, in which case you should forward <code>env = caller_env()</code> and
<code>user_env = caller_env(2)</code>.</dd></dl>

Arguments

Provides lifecycle management consistently across several functions.
Currently uses <code><a href='https://lifecycle.r-lib.org/reference/deprecate_soft.html'>lifecycle::deprecate_soft()</a></code> - i.e. warns only when used
directly. In future versions, this will switch to warning unconditionally
with <code><a href='https://lifecycle.r-lib.org/reference/deprecate_soft.html'>lifecycle::deprecate_warn()</a></code>, then throwing via
<code><a href='https://lifecycle.r-lib.org/reference/deprecate_soft.html'>lifecycle::deprecate_warn()</a></code>, and finally be deleted along with the subject
arguments.

Deprecation name helper — .name_deprecation

<dl>

<dt>pdist_name</dt>
<dd>the deprecated variable to check</dd>


<dt>dprimary_name</dt>
<dd>the deprecated variable to check</dd>


<dt>env, user_env</dt>
<dd>Pair of environments that define where <code>deprecate_*()</code>
was called (used to determine the package name) and where the function
called the deprecating function was called (used to determine if
<code>deprecate_soft()</code> should message).
These are only needed if you're calling <code>deprecate_*()</code> from an internal
helper, in which case you should forward <code>env = caller_env()</code> and
<code>user_env = caller_env(2)</code>.</dd>

</dl>

.name_deprecation: Deprecation name helper

Description

Usage

Arguments