pcd_stan_functions

This function reads all Stan files in the specified directory and extracts
the names of all functions defined in those files.

Provides functions for working with primary
event censored distributions and 'Stan' implementations for use in Bayesian
modeling. Primary event censored distributions are useful for modeling
delayed reporting scenarios in epidemiology and other fields (Charniga et
al. (2024) <doi:10.48550/arXiv.2405.08841>). It also provides support for
arbitrary delay distributions, a range of common primary distributions, and
allows for truncation and secondary event censoring to be accounted for
(Park et al. (2024) <doi:10.1101/2024.01.12.24301247>). A subset of
common distributions also have analytical solutions implemented, allowing
for faster computation. In addition, it provides multiple methods for
fitting primary event censored distributions to data via optional
dependencies.

Sam Abbott 

primarycensored

Primary Event Censored Distributions

Sam Abbott

Sam Brand

Adam Howes

James Mba Azam

Carl Pearson

Sebastian Funk

Kelly Charniga

pcd_stan_functions function

<dl><dt>stan_path</dt>
<dd>Character string specifying the path to the directory
containing Stan files. Defaults to the Stan path of the primarycensored
package.</dd></dl>

Arguments

Get Stan function names from Stan files — pcd_stan_functions

<dl>

<dt>stan_path</dt>
<dd>Character string specifying the path to the directory
containing Stan files. Defaults to the Stan path of the primarycensored
package.</dd>

</dl>

pcd_stan_functions: Get Stan function names from Stan files

Description

Usage

Value

Arguments

See Also