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procoil (version 2.0.2)

Prediction of Oligomerization of Coiled Coil Proteins

Description

The package allows for predicting whether a coiled coil sequence (amino acid sequence plus heptad register) is more likely to form a dimer or more likely to form a trimer. Additionally to the prediction itself, a prediction profile is computed which allows for determining the strengths to which the individual residues are indicative for either class. Prediction profiles can also be visualized as curves or heatmaps.

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Version

Version

2.0.2

License

GPL (>= 2)

Maintainer

Ulrich Bodenhofer

Last Published

February 15th, 2017

Functions in procoil (2.0.2)

CCModel-class

Class "CCModel"
CCModel-FileOps

Reading and writing of coiled coil prediction model from/to files
procoil-package

Prediction of Oligomerization of Coiled Coil Proteins
CCProfile-class

Class "CCProfile"
plot-methods

Plotting prediction profiles
predict-methods

Predict oligomerization of one or more coiled coil segments