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prodlim (version 1.4.3)

Product-limit estimation. Kaplan-Meier and Aalen-Johansson method for censored event history (survival) analysis

Description

Fast and user friendly implementation of nonparametric estimators for censored event history (survival) analysis.

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Version

Install

install.packages('prodlim')

Monthly Downloads

122,547

Version

1.4.3

License

GPL (>= 2)

Maintainer

Thomas Alexander Gerds

Last Published

May 1st, 2014

Functions in prodlim (1.4.3)

Hist

Create an event history response variable
atRisk

Drawing numbers of subjects at-risk of experiencing an event below Kaplan-Meier and Aalen-Johannsen plots.
getStates

States of a multi-state model
backGround

Background and grid color control.
row.match

Identifying rows in a matrix or data.frame
print.prodlim

Print objects in the prodlim library
SmartControl

Function to facilitate the control of arguments passed to subroutines.
summary.prodlim

Summary method for prodlim objects.
summary.Hist

Summary of event histories
predictSurvIndividual

Predict individual survival probabilities
sindex

Index for evaluation of step functions.
neighborhood

Symmetric neighborhoods for kernel smoothing
crModel

Competing risks model for simulation
meanNeighbors

Helper function to obtain running means for prodlim objects.
SimCompRisk

Simulate competing risks data
plot.prodlim

Plotting event probabilities over time
prodlim

product limit method
leaveOneOut

Compute jackknife pseudo values.
plotIllnessDeathModel

Plotting an illness-death-model.
jackknife

Compute jackknife pseudo values.
getEvent

Extract a column from an event history object.
plotCompetingRiskModel

Plotting a competing-risk-model.
SimSurv

Simulate survival data
confInt

Add point-wise confidence limits to the graphs of Kaplan-Meier and Aalen-Johannsen estimates of survival and cumulative incidence.
survModel

Survival model for simulation
markTime

Marking product-limit plots at the censored times.
quantile.prodlim

Quantiles for Kaplan-Meier and Aalen-Johannsen estimates.
PercentAxis

Percentage-labeled axis.
NN

Dummy function
clusterTestData

Data set with a clustered data structure, for testing the product limit method.
predict.prodlim

Predicting event probabilities from product limit estimates
plot.Hist

Box-arrow diagrams for multi-state models.