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prodlim (version 1.4.3)
Product-limit estimation. Kaplan-Meier and Aalen-Johansson method for censored event history (survival) analysis
Description
Fast and user friendly implementation of nonparametric estimators for censored event history (survival) analysis.
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Install
install.packages('prodlim')
Monthly Downloads
119,135
Version
1.4.3
License
GPL (>= 2)
Maintainer
Thomas Alexander Gerds
Last Published
May 1st, 2014
Functions in prodlim (1.4.3)
Search functions
Hist
Create an event history response variable
atRisk
Drawing numbers of subjects at-risk of experiencing an event below Kaplan-Meier and Aalen-Johannsen plots.
getStates
States of a multi-state model
backGround
Background and grid color control.
row.match
Identifying rows in a matrix or data.frame
print.prodlim
Print objects in the prodlim library
SmartControl
Function to facilitate the control of arguments passed to subroutines.
summary.prodlim
Summary method for prodlim objects.
summary.Hist
Summary of event histories
predictSurvIndividual
Predict individual survival probabilities
sindex
Index for evaluation of step functions.
neighborhood
Symmetric neighborhoods for kernel smoothing
crModel
Competing risks model for simulation
meanNeighbors
Helper function to obtain running means for prodlim objects.
SimCompRisk
Simulate competing risks data
plot.prodlim
Plotting event probabilities over time
prodlim
product limit method
leaveOneOut
Compute jackknife pseudo values.
plotIllnessDeathModel
Plotting an illness-death-model.
jackknife
Compute jackknife pseudo values.
getEvent
Extract a column from an event history object.
plotCompetingRiskModel
Plotting a competing-risk-model.
SimSurv
Simulate survival data
confInt
Add point-wise confidence limits to the graphs of Kaplan-Meier and Aalen-Johannsen estimates of survival and cumulative incidence.
survModel
Survival model for simulation
markTime
Marking product-limit plots at the censored times.
quantile.prodlim
Quantiles for Kaplan-Meier and Aalen-Johannsen estimates.
PercentAxis
Percentage-labeled axis.
NN
Dummy function
clusterTestData
Data set with a clustered data structure, for testing the product limit method.
predict.prodlim
Predicting event probabilities from product limit estimates
plot.Hist
Box-arrow diagrams for multi-state models.