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profileScoreDist (version 1.0.2)
Profile score distributions
Description
Regularization and score distributions for position count matrices.
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Version
Version
1.0.2
Version
1.0.2
License
MIT + file LICENSE
Maintainer
Paal O Westermark
Last Published
February 15th, 2017
Functions in profileScoreDist (1.0.2)
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INR
The position count matrix for INR.
plotDist
Plot background and signal distributions.
signalDist
Signal distribution.
regularizeMatrix
Careful regularization (pseudocount addition) to a position count matrix.
backgroundDist
Background distribution.
ProfileDist-class
ProfileDist
computeScoreDist
Compute exact position weight/count matrix score distribution.
scoreDistCutoffs
False discovery rate and power for PWM Score distributions.