protViz (version 0.2.06)

AA: AA - amino acid table

Description

Among other attributes it contains '1-letter code', 'monoisotopic mass' and 'average mass' of each amino acids.

format

contains a table

References

http://www.matrixscience.com/help/aa_help.html

http://education.expasy.org/student_projects/isotopident/htdocs/aa-list.html

http://www.unimod.org

Examples

data(AA)
    AA
    AA.lm<-lm(AA$Monoisotopic ~ AA$Average)

    plot(AA$Monoisotopic, AA$Average); 
    abline(AA.lm, col='grey')
    text(AA$Monoisotopic, AA$Average, AA$letter1, pos=3)

    plot(AA$Average-AA$Monoisotopic)  
    axis(3,1:20,AA$letter1); 
    abline(v=1:20,col='grey')