proteoQC (version 1.8.2)

labelRatio: Calculate the labeling efficiency of isobaric labeling data

Description

Calculate the labeling efficiency of isobaric labeling data

Usage

labelRatio(ms = NULL, iClass = 1, delta = 0.05, plot = TRUE)

Arguments

ms

MS/MS file.

iClass

Isobaric tag class, 1=iTRAQ-8plex.

delta

The mass error for reporter matching.

plot

Logical value

Value

• A vector object

Examples

mgf.zip <- system.file("extdata/mgf.zip", package = "proteoQC")
unzip(mgf.zip)
a <- labelRatio("test.mgf")