mergeFrames

data frame of file names and corresponding
  ids.

files

path

data frame of ids, channelnames and
  corresponding barcodes.

sampledesign


  At the end each channel in each iTRAQ experiment can be
  uniquly identified by a barcode.  If two channels of
  different experiments correspond to the same subject, the
  same barcode may be used and a method of combinig these
  measurments be chosen.


Provides methods for making inference in isobaric labelled
LC-MS/MS experiments, i.e. iTRAQ experiments. It provides a function that
reasonably parses a CSV-export from Proteome Discoverer(TM) into a data
frame that can be easily handled in R. Functions and methods are provided
for quality control, filtering, norming, and the calculation of response
variables for further analysis. The merging of multiple iTRAQ experiments
with respect to a reference is also covered.

mergeFrames: Merging multiple experiments

Description

Usage

Arguments