pVolcano

threshold

wheather results given in ratios or
  log-ratios

.foldchange

.plot

Provides methods for making inference in isobaric labelled
LC-MS/MS experiments, i.e. iTRAQ experiments. It provides a function that
reasonably parses a CSV-export from Proteome Discoverer(TM) into a data
frame that can be easily handled in R. Functions and methods are provided
for quality control, filtering, norming, and the calculation of response
variables for further analysis. The merging of multiple iTRAQ experiments
with respect to a reference is also covered.

pVolcano: Volcano plot

Description

Usage

Arguments