protr (version 1.4-1)

extractCTriad: Conjoint Triad Descriptor

Description

This function calculates the Conjoint Triad descriptor (dim: 343).

Usage

extractCTriad(x)

Arguments

x

A character vector, as the input protein sequence.

Value

A length 343 named vector

References

J.W. Shen, J. Zhang, X.M. Luo, W.L. Zhu, K.Q. Yu, K.X. Chen, Y.X. Li, H.L. Jiang. Predicting Protein-protein Interactions Based Only on Sequences Information. Proceedings of the National Academy of Sciences. 007, 104, 4337--4341.

Examples

# NOT RUN {
x = readFASTA(system.file("protseq/P00750.fasta", package = "protr"))[[1]]
extractCTriad(x)
# }