prozor (version 0.3.1)

create_fgcz_fasta_db: create fasta db from one or more fasta files

Description

create fasta db from one or more fasta files

Usage

create_fgcz_fasta_db(
  databasedirectory,
  useContaminants = loadContaminantsFasta2021(),
  revLab = "REV_",
  outputdir = NULL
)

Arguments

databasedirectory

directory with fasta files

useContaminants

contaminants to add

revLab

reverse label

outputdir

output directory

Value

list list(resDB, filepath , summary, mcall, dbname)

Examples

# NOT RUN {
print("NO exmple since function also writes the fasta files")

# }