pspline.sample.timeseries

model returned by <code><a rd-options="mgcv" href="/link/gam?package=pspline.inference&version=1.0.4&to=mgcv" data-mini-rdoc="mgcv::gam">gam</a></code> or <code><a rd-options="mgcv" href="/link/gamm?package=pspline.inference&version=1.0.4&to=mgcv" data-mini-rdoc="mgcv::gamm">gamm</a></code>

model

time series outcome generator function; see <code><a rd-options="" href="/link/pspline.estimate.timeseries?package=pspline.inference&version=1.0.4" data-mini-rdoc="pspline.inference::pspline.estimate.timeseries">pspline.estimate.timeseries</a></code> for more info

outcome

samples

time values at which the model will be evaluated during simulation

time

This is mainly used internally by <code>pspline.estimate.timeseries</code>, but
it's useful if you want to calculate summary statistics of simulation results other
than the ones returned by <code>pspline.estimate.timeseries</code>.

internal

Inference of infectious disease outcomes using generalized additive
(mixed) models with penalized basis splines (P-Splines). See
<https://medrxiv.org/cgi/content/short/2020.07.14.20138180v1>.

Ben Artin

pspline.inference

Estimation of Characteristics of Seasonal and Sporadic
Infectious Disease Outbreaks Using Generalized Additive
Modeling with Penalized Basis Splines

pspline.sample.timeseries function

model returned by <code><a rd-options='mgcv' href='gam'>gam</a></code> or <code><a rd-options='mgcv' href='gamm'>gamm</a></code>

time series outcome generator function; see <code><a rd-options='' href='pspline.estimate.timeseries'>pspline.estimate.timeseries</a></code> for more info

Runs simulations on an outbreak GAM/GAMM for the purpose of estimating time series outbreak outcomes, and
returns estimated time series outcomes for each simulation. — pspline.sample.timeseries

Runs simulations on an outbreak GAM/GAMM for the purpose of estimating time series outbreak outcomes, and
returns estimated time series outcomes for each simulation.

pspline.sample.timeseries: Runs simulations on an outbreak GAM/GAMM for the purpose of estimating time series outbreak outcomes, and returns estimated time series outcomes for each simulation.

Description

Usage

Arguments

Value