DataGeNET.Psy-class


Class <code>DataGeNET.Psy</code> is the basic object use in <code>psygenet2r</code> 
package. It is the main data container to using the different functions to
query PsyGeNET database and generate teir output. The constructors of this 
class are the functions <code>psygenetGene</code> and <code>psygenetDisease</code>.


Package to retrieve data from PsyGeNET database (www.psygenet.org) and to perform comorbidity studies with PsyGeNET's and user's data.

Alba GutierrezSacristan

psygenet2r

psygenet2r - An R package for querying PsyGeNET and to perform comorbidity studies in psychiatric disorders

DataGeNET.Psy-class function

 <dl>
<dt><code>type</code></dt><dd>Character containing <code>'gene'</code> of <code>'disease'</code>. It is 
used to eprform the correct query to PsyGeNET.</dd> <dt><code>search</code></dt><dd>Character containing <code>'single'</code> of <code>'list'</code>.It is 
used to eprform the correct query to PsyGeNET.</dd> <dt><code>database</code></dt><dd>Character containing the name of the database that will be
queried. It can take the values <code>'MODELS'</code> to use Comparative 
Toxigenomics Database, data from mouse and rat; <code>'GAD'</code> to use Genetic 
Association Database; <code>'CTD'</code> to use Comparative Toxigenomics Database, 
data from human; <code>'PsyCUR'</code> to use Psychiatric disorders Gene 
association manually curated; <code>'CURATED'</code> to use Human, manually 
curated databases (PsyCUR and CTD); or <code>'ALL'</code> to use all these 
databases.</dd> <dt><code>term</code></dt><dd>Charcter with the term(s) to search into the database(s).</dd> <dt><code>qresult</code></dt><dd><code>data.frame</code> with the obtained result</dd> </dl>

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Class <code>DataGeNET.Psy</code> is the basic object use in <code>psygenet2r</code> 
package. It is the main data container to using the different functions to
query PsyGeNET database and generate teir output. The constructors of this 
class are the functions <code>psygenetGene</code> and <code>psygenetDisease</code>.

DataGeNET.Psy-class: Class DataGeNET.Psy

Description

Arguments

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See Also