enrichedPD

Name or vector of names (that can be both code or uml) to 
specific genes from PsyGeNET.

gene

Name of the database that will be queried. It can take the 
values <code>'MODELS'</code> to use Comparative Toxigenomics Database, data from 
mouse and rat; <code>'GAD'</code> to use Genetic Association Database; <code>'CTD'</code>
to use Comparative Toxigenomics Database, data from human; <code>'PsyCUR'</code> to
use Psychiatric disorders Gene association manually curated; <code>'CURATED'</code>
to use Human, manually curated databases (PsyCUR and CTD); or <code>'ALL'</code> 
to use all these databases. Default <code>'CURATED'</code>.

database

By default <code>FALSE</code>. Change it to <code>TRUE</code> to get a
on-time log from the function.

verbose


Test the enrichment of a given gene list on Psychiatric Disorders from 
PsyGeNET.


Package to retrieve data from PsyGeNET database (www.psygenet.org) and to perform comorbidity studies with PsyGeNET's and user's data.

Alba GutierrezSacristan

psygenet2r

psygenet2r - An R package for querying PsyGeNET and to perform comorbidity studies in psychiatric disorders

enrichedPD function

Test the enrichment of a given gene list on Psychiatric Disorders from 
PsyGeNET.

enrichedPD: Enrichment of a user's input (genes) in PsyGeNET's diseases.

Description

Usage

Arguments

Value

Examples