plot,DataGeNET.Psy,ANY-method: Plots the content of a DataGeNET.Psy or JaccardIndexPsy
object.
Description
This functions llows to create a variety of plots for DataGeNEt.Psy
and JaccardIndexPsy objects.
Usage
"plot"(x, y, layout = igraph::layout.fruchterman.reingold, type = "disease", verbose = FALSE, ...)
Arguments
x
Object of class DataGeNET.Psy
y
NOT USED
layout
Function to design the location of the different nodes. By
default layout.fruchterman.reingold from igraph is used.
type
Type of the drawn chart. By default it is "disease" but
it also can be "individual", "disease",
"disease class", "venn", "barplot",
"heatmapGenes", "heatmapScore" or "heatmap".
verbose
By default FALSE. If set to TRUE information
on the drawing process will be shown.