check_col

Some functions require additional columns. Check that they are named in the pedigree.

Inbreeding-purging analysis of pedigreed populations, including the computation of the inbreeding coefficient, partial, ancestral and purged inbreeding coefficients, and measures of the opportunity of purging related to the individual reduction of inbreeding load.
In addition, functions to calculate the effective population size and other parameters relevant to population genetics are included.
See López-Cortegano E. (2021) <doi:10.1093/bioinformatics/btab599>.

Eugenio L<c3><b3>pez-Cortegano

purgeR

Inbreeding-Purging Estimation in Pedigreed Populations

Eugenio López-Cortegano

check_col function

<dl><dt>names</dt>
<dd>Column names (all)</dd>
<dt>name</dt>
<dd>Column name to check.</dd></dl>

Arguments

Check that optional column is included — check_col

<dl>

<dt>names</dt>
<dd>Column names (all)</dd>


<dt>name</dt>
<dd>Column name to check.</dd>

</dl>

check_col: Check that optional column is included

Description

Usage

Value

Arguments