check_types

Columns for id, dam and sire are mandatory, and required to be of type integer

Inbreeding-purging analysis of pedigreed populations, including the computation of the inbreeding coefficient, partial, ancestral and purged inbreeding coefficients, and measures of the opportunity of purging related to the individual reduction of inbreeding load.
In addition, functions to calculate the effective population size and other parameters relevant to population genetics are included.
See López-Cortegano E. (2021) <doi:10.1093/bioinformatics/btab599>.

Eugenio L<c3><b3>pez-Cortegano

purgeR

Inbreeding-Purging Estimation in Pedigreed Populations

Eugenio López-Cortegano

check_types function

<dl><dt>id</dt>
<dd>Vector of individual ids.</dd>
<dt>dam</dt>
<dd>Vector of dam ids.</dd>
<dt>sire</dt>
<dd>Vector of sire ids.</dd></dl>

Arguments

Check that mandatory column names are of type int — check_types

<dl>

<dt>id</dt>
<dd>Vector of individual ids.</dd>


<dt>dam</dt>
<dd>Vector of dam ids.</dd>


<dt>sire</dt>
<dd>Vector of sire ids.</dd>

</dl>

check_types: Check that mandatory column names are of type int

Description

Usage

Value

Arguments