idx_ancestors

Creates a vector of length N (the number of individuals)
Only coordinates for valid ancestors will be given

Inbreeding-purging analysis of pedigreed populations, including the computation of the inbreeding coefficient, partial, ancestral and purged inbreeding coefficients, and measures of the opportunity of purging related to the individual reduction of inbreeding load.
In addition, functions to calculate the effective population size and other parameters relevant to population genetics are included.
See López-Cortegano E. (2021) <doi:10.1093/bioinformatics/btab599>.

Eugenio L<c3><b3>pez-Cortegano

purgeR

Inbreeding-Purging Estimation in Pedigreed Populations

Eugenio López-Cortegano

idx_ancestors function

<dl><dt>ids</dt>
<dd>Ancestor identities</dd>
<dt>N</dt>
<dd>Total number of individuals</dd></dl>

Arguments

Index ancestors — idx_ancestors

<dl>

<dt>ids</dt>
<dd>Ancestor identities</dd>


<dt>N</dt>
<dd>Total number of individuals</dd>

</dl>

idx_ancestors: Index ancestors

Description

Usage

Value

Arguments