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pvclust (version 1.2-2)

Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling

Description

pvclust is a package for assessing the uncertainty in hierarchical cluster analysis. It provides AU (approximately unbiased) p-values as well as BP (boostrap probability) values computed via multiscale bootstrap resampling.

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Version

Install

install.packages('pvclust')

Monthly Downloads

6,285

Version

1.2-2

License

GPL (>= 2)

Maintainer

Ryota Suzuki

Last Published

April 13th, 2011

Functions in pvclust (1.2-2)

plot.pvclust

Draws Dendrogram with P-values for Pvclust Object

print.pvclust

Print Function for Pvclust Object

pvclust

Calculating P-values for Hierchical Clustering

msfit

Curve Fitting for Multiscale Bootstrap Resampling

pvpick

Find Clusters with High/Low P-values

msplot

Drawing the Results of Curve Fitting for Pvclust Object

lung

DNA Microarray Data of Lung Tumors

seplot

Diagnostic Plot for Standard Error of p-value