genfullConsensusGraph

steiner tree graph generated by SteinerTree_cons function.

ST_net

steiner tree graph extended with consensus target genes and
the edges between TFs and target genes.

ST_TFTG


Combine SteinerNet with bipartite graph to get full consensus network.


manip

pwOmics performs pathway-based level-specific data
comparison of matching omics data sets based on pre-analysed
user-specified lists of differential genes/transcripts and
proteins. A separate downstream analysis of proteomic data
including pathway identification and enrichment analysis,
transcription factor identification and target gene
identification is opposed to the upstream analysis starting
with gene or transcript information as basis for identification
of upstream transcription factors and regulators. The
cross-platform comparative analysis allows for comprehensive
analysis of single time point experiments and time-series
experiments by providing static and dynamic analysis tools for
data integration.

genfullConsensusGraph: Combine SteinerNet with bipartite graph to get full consensus network.

Description

Usage

Arguments

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