qcQpcr (version 1.5)

qcQpcr-package: Histone ChIP-Seq qPCR Analyzer tools:::Rd_package_title("qcQpcr")

Description

Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC). tools:::Rd_package_description("qcQpcr")

Author

Alireza Lorzadeh

Details

The DESCRIPTION file: tools:::Rd_package_DESCRIPTION("qcQpcr") tools:::Rd_package_indices("qcQpcr") qcQpcr(xx,'Title for you graph')

Examples

  library(ggplot2)
  data(SampleTest)
  qcQpcr(SampleTest,'Title for your graph')