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qra (version 0.2.7)

Quantal Response Analysis for Dose-Mortality Data

Description

Functions are provided that implement the use of the Fieller's formula methodology, for calculating a confidence interval for a ratio of (commonly, correlated) means. See Fieller (1954) . Here, the application of primary interest is to studies ofinsect mortality response toincreasing doses of a fumigant, or, e.g., to time in coolstorage. The formula is used to calculate a confidence interval for the dose or time required to achieve a specified mortality proportion, commonly 0.5 or 0.99. Vignettes demonstrate link functions that may be considered, checks on fitted models, and alternative choices of error family. Note in particular the betabinomial error family. See also Maindonald, Waddell, and Petry (2001) .

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install.packages('qra')

Monthly Downloads

635

Version

0.2.7

License

GPL-3

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Maintainer

John Maindonald

Last Published

October 29th, 2021

Functions in qra (0.2.7)

rayBlight

Incidence of ray blight disease of pyrethrum
scaleLocAdjust

Estimate dispersion as a function of predicted values
codling1988

Dose-mortality data, for fumigation of codling moth with methyl bromide
graphSum

Draw graphs of insect mortality or other exposure-response data
extractLT

Obtain complete set of LT or LD estimates
gpsWithin

Use given vector to identify groups with specified categories
checkDisp

Reproduce data for the linear model scale-location diagnostic plot
qra-package

qra: A package for calculations that relate to dose-mortality, or time-mortality, or other such models.
HawCon

Hawaiian Contemporary Cold Treatment Dataset
getScaleCoef

Extract scaling coefficients from vector returned by scale()
varRatio

First order approximation to variance of y-ordinate to slope ratio
malesINfirst12

Number of males among first 12 in families of 13 children
kerrich

Kerrich Coin Toss Trial Outcomes
foldp

Title Function to calculate ratio of p+eps to 1-p+eps.
fieller

Confidence Limits for Lethal Dose Estimate From Dose-response Line
getRho

Extract estimates of the intra-class correlation from a glmmTMB model object with beta-binomial error.
fpower

Folded Power Transformation