qtl2 (version 0.32)

interp_map: Interpolate between maps

Description

Use interpolate to convert from one map to another

Usage

interp_map(map, oldmap, newmap)

Value

Object of same form as input map but in the units as in newmap.

Arguments

map

The map to be interpolated; a list of vectors.

oldmap

Map with positions in the original scale, as in map.

newmap

Map with positions in the new scale.

Examples

# load example data
iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2"))

# positions to interpolate from cM to Mbp
tointerp <- list("7" = c(pos7.1= 5, pos7.2=15, pos7.3=25),
                 "9" = c(pos9.1=20, pos9.2=40))

interp_map(tointerp, iron$gmap, iron$pmap)