plot_sdp

plot the strain distribution patterns of SNPs
using tracks of tick-marks for each founder strain

hgraphics

Provides a set of tools to perform quantitative
trait locus (QTL) analysis in experimental crosses. It is a
reimplementation of the 'R/qtl' package to better handle
high-dimensional data and complex cross designs.
Broman et al. (2019) <doi:10.1534/genetics.118.301595>.

Karl Broman

qtl2

Quantitative Trait Locus Mapping in Experimental Crosses

Karl W Broman

R Core Team 

plot_sdp function

<dl><dt>pos</dt>
<dd>vector of SNP positions</dd>
<dt>sdp</dt>
<dd>vector of strain distribution patterns (as integers)</dd>
<dt>strain_labels</dt>
<dd>names of the strains</dd>
<dt>...</dt>
<dd>additional graphic arguments</dd></dl>

Arguments

plot strain distribution patterns for SNPs — plot_sdp

<dl>

<dt>pos</dt>
<dd>vector of SNP positions</dd>


<dt>sdp</dt>
<dd>vector of strain distribution patterns (as integers)</dd>


<dt>strain_labels</dt>
<dd>names of the strains</dd>


<dt>...</dt>
<dd>additional graphic arguments</dd>

</dl>

plot_sdp: plot strain distribution patterns for SNPs

Description

Usage

Value

Arguments

Details

See Also

Examples