read_fast

Read fast database with format <code>fst</code>. Use first column
of database (must be named `ind`) as rownames if desired. R/qtl2 routines assume data frames have
rownames to use to align individuals.

Routines in 'qtl2' to study allele patterns in quantitative trait loci (QTL)
mapping over a chromosome.
Useful in crosses with more than two alleles to identify how sets of alleles,
genetically different strands at the same locus, have different response levels.
Plots show profiles over a chromosome.
Can handle multiple traits together.
See <https://github.com/byandell/qtl2pattern>.

Brian Yandell

qtl2pattern

Pattern Support for 'qtl2' Package

Brian S Yandell 

read_fast function

<dl><dt>datapath</dt>
<dd>character string path to database</dd>
<dt>columns</dt>
<dd>names or indexes for columns to be extracted</dd>
<dt>rownames</dt>
<dd>use first column of rownames if <code>TRUE</code> (can supply column number)</dd></dl>

Arguments

Read fast database with possible rownames — read_fast

<dl>

<dt>datapath</dt>
<dd>character string path to database</dd>


<dt>columns</dt>
<dd>names or indexes for columns to be extracted</dd>


<dt>rownames</dt>
<dd>use first column of rownames if <code>TRUE</code> (can supply column number)</dd>

</dl>

read_fast: Read fast database with possible rownames

Description

Usage

Value

Arguments

See Also