parallel.qtlhot

Code for parallelizing R/qtlhot. See installed parallel directory for proper
use. There is apparently an S3 parallel method, so doc has to be as shown
below, even though it is called as parallel.qtlhot.

utilities

Functions to infer co-mapping trait hotspots and causal models.
Chaibub Neto E, Keller MP, Broman AF, Attie AD, Jansen RC, Broman KW, Yandell BS (2012)
Quantile-based permutation thresholds for QTL hotspots. Genetics 191 : 1355-1365.
<doi:10.1534/genetics.112.139451>.
Chaibub Neto E, Broman AT, Keller MP, Attie AD, Zhang B, Zhu J, Yandell BS (2013)
Modeling causality for pairs of phenotypes in system genetics. Genetics 193 : 1003-1013.
<doi:10.1534/genetics.112.147124>.

Brian Yandell

qtlhot

Inference for QTL Hotspots

parallel.qtlhot function

<dl><dt>x</dt>
<dd>phase of parallel processing (1,2,3)</dd>
<dt>data</dt>
<dd>index for parallel processing (1,2,...)</dd>
<dt>...</dt>
<dd>additional arguments passed along</dd>
<dt>dirpath</dt>
<dd>directory path as character string</dd></dl>

Arguments

Brian S Yandell and Elias Chaibub Neto

Author

Code for parallelizing R/qtlhot. — parallel.qtlhot

<dl>

<dt>x</dt>
<dd>phase of parallel processing (1,2,3)</dd>


<dt>data</dt>
<dd>index for parallel processing (1,2,...)</dd>


<dt>...</dt>
<dd>additional arguments passed along</dd>


<dt>dirpath</dt>
<dd>directory path as character string</dd>

</dl>

parallel.qtlhot: Code for parallelizing R/qtlhot.

Description

Usage

Arguments

Author

See Also