transpose_real

Transposes the real-time data table exported by the BMG software. Accepts
output from the function, "get_real".

Designed for the curation and analysis of data generated from real-time quaking-induced conversion (RT-QuIC) assays first described by Atarashi et al. (2011) <doi:10.1038/nm.2294>. 'quicR' calculates useful metrics such as maxpoint ratio: Rowden et al. (2023) <doi:10.1099/vir.0.069906-0>; time-to-threshold: Shi et al. (2013) <doi:10.1186/2051-5960-1-44>; and maximum slope. Integration with the output from plate readers allows for seamless input of raw data into the R environment.

Gage Rowden

quicR

RT-QuIC Data Formatting and Analysis

transpose_real function

<dl><dt>data</dt>
<dd>A dataframe generated from get_real.</dd></dl>

Arguments

Transpose Real-Time Data — transpose_real

<dl>

<dt>data</dt>
<dd>A dataframe generated from get_real.</dd>

</dl>

transpose_real: Transpose Real-Time Data

Description

Usage

Value

Arguments