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quiddich (version 1.0.0)

QUick IDentification of DIagnostic CHaracters

Description

Provides tools for an automated identification of diagnostic molecular characters, i.e. such columns in a given nucleotide or amino acid alignment that allow to distinguish taxa from each other. These characters can then be used to complement the formal descriptions of the taxa, which are often based on morphological and anatomical features. Especially for morphologically cryptic species, this will be helpful. QUIDDICH distinguishes between four different types of diagnostic characters. For more information, see "Kuehn, A.L., Haase, M. 2019. QUIDDICH: QUick IDentification of DIagnostic CHaracters."

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Version

Install

install.packages('quiddich')

Monthly Downloads

154

Version

1.0.0

License

GPL-3

Maintainer

A. Kuehn

Last Published

March 25th, 2019

Functions in quiddich (1.0.0)

diagCharNA

Identification of diagnostic molecular characters in nucleotide alignments for the delineation of taxa
changesAA

Identification of diagnostic molecular characters in a nucleotide alignment that also cause diagnostic characters in the corresponding amino acid alignment
diagCharAA

Identification of diagnostic molecular characters in amino acid alignments for the delineation of taxa
quiddich-package

QUick IDentification of DIagnostic CHaracters