Plot spawner-recruit curve based on output from Stock Synthesis model.
SSplotSpawnrecruit(replist, subplot = 1:2, add = FALSE, plot = TRUE,
print = FALSE, xlim = NULL, ylim = NULL,
xlab = "Spawning biomass (mt)", ylab = "Recruitment (1,000s)",
bioscale = "default", plotdir = "default", pwidth = 6.5, pheight = 5,
punits = "in", res = 300, ptsize = 10, cex.main = 1, verbose = TRUE,
colvec = c("blue", "green3", "black", "red"), legend = TRUE,
legendloc = "topleft", minyr = "default", textmindev = 0.5,
virg = TRUE, init = TRUE, forecast = FALSE)list created by SS_output
vector of which subplots to show. 1=plot without labels, 2=plot with year labels.
add to existing plot?
plot to active plot device?
print to PNG files?
optional control of x range
optional control of y range
x-axis label
y-axis label
multiplier on spawning biomass, set to 0.5 for single-sex models
directory where PNG files will be written. by default it will be the directory where the model was run.
width of plot
height of plot
units for PNG file
resolution for PNG file
point size for PNG file
character expansion for plot titles
report progress to R GUI?
vector of length 4 with colors for 3 lines and 1 set of points
add a legend to the figure?
location of legend. See ?legend for more info
minimum year of recruitment deviation to show in plot
minimum recruitment deviation for label to be added so only extreme devs are labeled (labels are added to first and last years as well). Default=0.7.
add point for equilibrium conditions (x=B0,y=R0)
add point for initial conditions (x=B1,y=R1), only appears if this point differs from virgin values
include forecast years in the curve?