combineNodes

vector of node names specifiying which nodes
  to combine.

nodes

graph

string. Name of the newly created node
  that will combine the specified nodes.

newName


This gracefully combines nodes from a regulatory graph.
This is basically a wrapper for graph::combineNodes(nodes,
graph, newName, collapseFunction=max). If there are
duplicated edges for the nodes, the maximum edgeweight will
be used for the new connection.


Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

Frank Kramer

rBiopaxParser

Parses BioPax files and represents them in R

combineNodes function

This gracefully combines nodes from a regulatory graph.
This is basically a wrapper for graph::combineNodes(nodes,
graph, newName, collapseFunction=max). If there are
duplicated edges for the nodes, the maximum edgeweight will
be used for the new connection.

combineNodes: This function gracefully combines nodes of a regulatory graph.

Description

Usage

Arguments

Value

Examples