createBiopax

level

This function creates a new Biopax model from scratch. This
is not necessary if you want to parse a BioPAX export from
a file, please see: readBiopax. Returns a biopax model,
which is a list with named elements: <dl>
<dt>df</dt><dd>The data.frame representing the biopax in R</dd><dt>ns_rdf</dt><dd>RDF Namespace</dd>
 <dt>ns_owl</dt><dd>OWL Namespace</dd><dt>ns_bp</dt><dd>Biopax Namespace</dd>
 <dt>file</dt><dd>NULL</dd>
 </dl>

Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

Frank Kramer

rBiopaxParser

Parses BioPax files and represents them in R

createBiopax function

This function creates a new Biopax model from scratch. This
is not necessary if you want to parse a BioPAX export from
a file, please see: readBiopax. Returns a biopax model,
which is a list with named elements: [object Object],[object Object],[object Object],[object Object],[object Object]

createBiopax: This function creates a new Biopax model from scratch

Description

Usage

Arguments

Value

Examples