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rBiopaxParser (version 2.10.0)

internal_generateXMLfromBiopax: This function generates the xmlTree from the supplied biopax model.

Description

This function is used internally by writeBiopax. It can also be called directly with a fitting dataframe in list(df=data.frame()), but this will probably break things.

Usage

internal_generateXMLfromBiopax(biopax, namespaces = namespaces, verbose = TRUE)

Arguments

biopax
A biopax model
namespaces
A list of namespaces to use for the generated XML/RDF file
verbose
logical

Value

Returns the xmlTree generated from the supplied biopax model.